Domain: Alfin-like

HMM file

Alignment

CLUSTAL 2.1 multiple sequence alignment


MIMGUwo_Migut.L02016.1.p_121.6 CGSCGGNYNAD--EFWIGCDICERWYHGKCVKITPAKAESIKQYKCPSC
MIMGUwo_Migut.J00159.1.p_121.6 CGSCGGNYNAD--EFWIGCDICERWYHGKCVKITPAKAESIKQYKCPSC
POPTRwo_Potri.008G069200.1_117 CGSCAGNYNAD--EFWIGCDICERWYHGKCVKITPAKAESIKQYKCPSC
POPTRwo_Potri.016G116900.1_120 CGSCGGNYNAD--EFWIGCDVCERWYHGKCVKITPAKADSIKQYKCPSC
ZEAMAwo_GRMZM2G148810_P03_118. CGTCGGIYSAD--EFWIGCDVCEKWYHGKCVKITPAKAESIKQYKCPSC
ZEAMAwo_GRMZM2G017142_P01_118. CGTCGGIYSAD--EFWIGCDVCEKWYHGKCVKITPAKAESIKQYKCPSC
BETVUwo_Bv5_097800_momm.t1_120 CGSCGGNYSAD--EFWICCDICERWFHGKCVKITPAKAENIKQYKCPSC
PHYPAV30wo_Phpat.007G100900.1. CGSCGGPYTAD--EFWIGCDICEKWFHGKCVKITPARAEHIKQYKCPSC
PHYPAV30wo_Phpat.011G027500.1. CGSCGGPYTAD--EFWIGCDICEKWFHGKCVKITPARAEHIKQYKCPSC
PHYPAV30wo_Phpat.001G036100.1. CGSCGGPYTAD--EFWIGCDICEKWYHGKCVKITPARAEHIKQYKCPSC
SELMO_estExt_fgenesh1_pm.C_330 CGTCNGPYNADKKEFWIGCDTCQKWFHGSCVKVTPARAEHIKQYKCPSC
ZEAMAwo_GRMZM2G156088_P02_88.8 CGTCGGMYSENG-VFWIGCDICDKWYHGDCVRITPAEAKHIDQYGCPAC
ZEAMAwo_GRMZM2G016564_P01_57.9 ------MYSENG-VFWICFDICDKWYHGDCVCITPVEAKHIDQYSCPAC
SORBIwo_Sb06g017810.1_110.0_1 CGTCGGRYS-NE-EFWIGCDICEKWYHGDCVRITPARADYIKQYKCPAC
KLEFL_kfl00378_0120_110.7_1 CGICGGPYS-QS-EFWIGCDICEKWYHGRCVKITPAKAEHIKQYKCPAC
PHYPAV30wo_Phpat.005G019700.1. CGTCGGSYT-AE-EFWIGCDICEKWYHGKCVKITPARAEHIKQYKCPAC
PHYPAV30wo_Phpat.006G087600.1. CGTCGGSYT-AD-EFWIGCDICEKWYHGKCVKITPARAEHIKQYKCPAC
SELMO_e_gw1.22.518.1_120.0_1 CGTCGGNYTSD--EFWIGCDVCEKWFHGKCVKITPARAEHIKKYKCPSC
ZEAMAwo_GRMZM2G172001_P04_116. CGTCGTNDSKD--QFWICCDNCEKWYHGKCVKITPARAEHIKQYKCPDC
ZEAMAwo_GRMZM2G080917_P01_116. CGTCGTNDGKD--QFWICCDNCEKWYHGKCVKITPARAEHIKQYKCPDC
ZEAMAwo_GRMZM2G153087_P01_102. CGACGLGY--D--DFWICCDLCETWFHGKCVKITPAKADHIKQYKCPSC
SORBIwo_Sb08g006530.1_103.9_1 CGACGLGY--D--DFWICCDLCETWFHGKCVKITPAKAEHIKQYKCPSC
CARPA_28.95_123.9_1 CGACGENYASD--EFWICCDICEKWFHGKCVKITPARAEHIKQYKCPSC
EUCGRwo_Eucgr.C03146.1_123.9_1 CGACGENYASD--EFWICCDICEKWFHGKCVKITPARAEHIKQYKCPSC
PINTA_000007350-RA_125.9_1 CGACGDNYASD--EFWICCDMCERWFHGKCVKITPARAEHIKQYKCPSC
BETVUwo_Bv_16270_jryj.t1_124.8 CGACGDNYASD--EFWICCDICERWFHGKCVKITPARAEHIKQYKCPSC
PINTA_000084059-RA_96.9_1 CGACGENYASD--EFWIYCDMCEKWFHVKCLKISPTISEHIKHYKCPSY
ARATHwo_AT5G26210.1_122.4_1 CGACGESYAAD--EFWICCDLCEMWFHGKCVKITPARAEHIKQYKCPSC
POPTRwo_Potri.004G230500.1_123 CGACGESYGTD--EFWICCDMCEKWFHGKCVKITPAKAEHIKQYKCPSC
BRADIwo_Bradi4g21040.1_119.7_1 CGACGDNYGQD--EFWICCDACETWFHGKCVKITPAKAEHIKHYKCPNC
CARPA_1158.2_122.9_1 CGACGDNYATD--EFWICCDVCERWFHGKCVKITPAKAEHIKQYKCPGC
ZEAMAwo_AC225147.4_FGP003_117. CGSCGGLYNAN--EFWIGCDICERWFHGKCVRITPAKADHIKHYKCPDC
ORYSAJAPONwo_LOC_Os03g60390.1_ CGTCGGLYNAN--EFWIGCDICERWFHGKCVRITPAKAEHIKHYKCPDC
SORBIwo_Sb02g006980.1_111.9_1 CGSCSGLYNSS--EFWIGCDICERWFHGKCVRITPAKAEQIKHYKCPDC
ORYSAJAPONwo_LOC_Os04g36730.1_ CGACGEAYANG--EFWICCDICETWFHGKCVRITPAKAEHIKHYKCPGC
HOMSAwo_CCDS55420.1_Hs106_chrX C-LCRLPYDV--TRFMIECDMCQDWFHGSCVGVEEEKAADIDLYHCPNC
HOMSAwo_CCDS55418.1_Hs106_chrX C-LCRLPYDV--TRFMIECDMCQDWFHGSCVGVEEEKAADIDLYHCPNC
DROME_FBpp0290562_54.4_1 C-SCRQPYDE--SQFYICCDKCQDWFHGRCVGILQSEAEFIDEYVCPEC
DROME_FBpp0304413_54.4_1 C-SCRQPYDE--SQFYICCDKCQDWFHGRCVGILQSEAEFIDEYVCPEC
HOMSAwo_CCDS11673.1_Hs106_chr1 C-ICKTPYDE--SKFYIGCDRCQNWYHGRCVGILQSEAELIDEYVCPQC
KLEFL_kfl00197_0090_50.5_1 C-ICRKPYKE--GDFMIHCDKCKEWFHGNCVKVTQREAAKIKKYVCPTC
DICDI_DDB0231781_43.0_1 C-VCQKKYDK--TKFMIACDRCDEWYHGDCVYISEKDAKRIKSYVCANC
PINTA_000065193-RA_69.5_1 CGSCDRLYKE--GEFWIQCDDCDIWYHGRCVRVTQKQSKNIDLYTCPHC
PINTA_000088883-RA_44.3_1 CGNCKVVYKSD-GYFWVRCHRCKTRFHGHCVNVLGENAENIRKYYCPLC
PINTA_000088883-RA_43.6_2 CGICGVLYEEN-DYFWVQCDICQKWFHGDCLNVSPDVAQENHVYCC-VC
SELMO_estExt_Genewise1Plus.C_1 CGICADPHNT--SQFWIACDSCRKWYHGSCVKVNASKAAGIKSYNCPSC
CHLRE_Cre10.g441050.t1.2_63.3_ CPACGRLYRTD--EFWIACDACDTWYCGRCAKMTEKKAAQMKHWRCGQC
VOLCA_Vocar20008424m_63.5_1 CPSCGRLYRTE--EFWIACDFCDTWYCGRCAKMTEKKASQMKQWRCNQC
COCSP_estExt_Genewise1Plus.C_1 CPNCGRVYRTG--EFWIACDFCDTWYDGKCVQMTPQKAQRMGKWRCPAC
CHLSP_estExt_fgenesh3_pm.C_150 CPNCGHTYRSG--EFWIQCDVCDRWFDGKCVGMTAKLAEQQPQWKCPLC
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