Domain: NF-YC

HMM file

Alignment

CLUSTAL 2.1 multiple sequence alignment


PHYPAV30wo_Phpat.003G138000.1. PAARIKKIMQAD-EEVG-----------KIAMATPVLISKALELFLQNLC
PHYPAV30wo_Phpat.008G006500.1. PAARIKKIMQAD-EEVG-----------KIAMATPVLISKALELFLQNLC
PHYPAV30wo_Phpat.004G025200.1. --ARIKKIMQAD-EEVG-----------KIAVATPVLISKALEMFLQNLC
SELMO_gw1.3.131.1_121.7_1 --ARIKKIMQAD-EEVG-----------KIALATPVLISKALELFLQDLC
VITVI_GSVIVT01036581001_132.7_ PAARIKKIMQAD-EDVG-----------KIALAVPVLVSKALELFLQDLC
BRADIwo_Bradi2g21290.1_121.8_1 PAPRIKKIMQAD-EDVG-----------KIALAVPVLVSKALELFLQDLC
KLEFL_kfl00260_0090_107.6_1 PTGRIKKVMQAD-DEVG-----------KVAVASPVLISRALELFLQKLV
CALTU_IDg19103t1_85.4_1 PVARIKKIMQAD-EDVG-----------KIATSTPILVGKALECLMSEVL
CALTU_IDg9361t1_96.8_1 PVARIKKIMQAD-EDVG-----------KIATATPVLVAKALECLMEDLL
NEUCR_NCU06405T0_103.5_1 PTARIKRIMQAD-EEVG-----------KVAQQTPIAVGKALELFMVQLV
CHLSP_IGS.gm_12_00016_85.5_1 --ARIKKMMQSD-EDVG-----------KVSKASPVLIAKALDIFLQSMV
EMIHU_212580_76.7_1 PAAKIKKLMQSD-DDVG-----------RIGPAVPAVVSRCLERFIGDLV
GLYMAwo_Glyma.11G250000.1.p_92 PKGRVKKIMALD-KDVK-----------RVSSEALFLVSRSTELFLQFLA
CARPA_34.36_175.3_1 PLARIKKIMKAD-EDVR-----------MISAEAPVIFAKACEMFILELT
GLYMAwo_Glyma.08G165700.1.p_17 PLARIKKIMKAD-EDVR-----------MISAEAPVIFAKACEMFILELT
PINTA_000055982-RA -LARIKKIMKTD-EYVR-----------MISAEAPVIFAKACEMLILELS
SELMO_gw1.51.449.1_175.6_1 PLARIKKIMKAD-EDVR-----------MISAEAPVLFAKACEMFILELT
PHYPAV30wo_Phpat.014G024300.1. PLARIKKIMKAD-EDVR-----------MISAEAPVLFAKACEMFILELT
BRADIwo_Bradi3g39280.1_169.2_1 PLARIKKIMKAD-EDVR-----------MIAAEAPVVFARACEMFILELT
BRADIwo_Bradi4g33290.1_169.2_1 PLARIKKIMKAD-EDVR-----------MIAAEAPVVFARACEMFILELT
CARPA_13.107_130.6_1 --------MKAD-EDVR-----------MISAEAPILFAKACELFILELT
ZEAMAwo_GRMZM2G089812_P01_170. PLARIKKIMKAD-EDVR-----------MISAEAPVLFAKACELFILELT
CYAPA_7210_156.2_1 PLARIKKIMKSD-EDVRPATSCAQPALQMISAEAPVLFSKACEMFILELT
GALSU_XP_005703768.1_167.9_1 PLARIKKIMKSD-EDVR-----------MISAEAPALFSKACEMFILELT
OSTTA_Ot11g00340_176.5_1 PLARIKKIMKSD-EDVR-----------MISSEAPVLFAKACEMFVLELT
CHLRE_Cre12.g556400.t1.1_175.3 PLARIKKIMKSD-EDVR-----------MISAEAPVLFAKACEMFILELT
MICPURCC299_EuGene.1200010037_ PLARIKKIMKSD-EDVR-----------MISSEAPVLFAKACEMFILELT
KLEFL_kfl00591_0040_173.2_1 PFARIKKIMKAD-EDVR-----------MISAEAPVLFAKACEMFILELT
SELMO_gw1.12.920.1_174.7_1 PLARIKKIMKAD-EDVR-----------MISGEAPVLFAKACEMFILELT
PINTA_000085916-RA_120.5_1 --------MKSD-EHVR-----------MISAEAPVVFTKACEMFISELT
PINTA_000064116-RA_153.0_1 PLARIKKIMKSD-EHVR-----------MISAEAPVVFSKACEMFISELT
PINTA_000013547-RA_153.6_1 PLARIKKIMKSD-EHVR-----------MISAEAPVLFAKACEMFISELT
PINTA_000043006-RA_160.7_1 PLARIKKIMKSDDENVR-----------MISAEAPVVFAKACEMFINELT
HOMSAwo_CCDS455.1_Hs106_chr1_1 PLARIKKIMKLD-EDVK-----------MISAEAPVLFAKAAQIFITELT
HOMSAwo_CCDS44121.1_Hs106_chr1 PLARIKKIMKLD-EDVK-----------MISAEAPVLFAKAAQIFITELT
SELMO_e_gw1.1.1968.1_164.9_1 PLARIKKIMKAD-EDVK-----------MISAEAPVLFAKACELFILELT
FRACY_206982_160.1_1 PLARIKRIMK-SDEDVR-----------MISAEAPVLFAKACELFILDLS
AMBTR_evm_27.model.AmTr_v1.0_s PLARIKKIMKRSGEDVR-----------MISGEAPIVFAKACELFIEDIA
BETVUwo_Bv_08570_zsar.t1_151.7 PLARIKRIMK-SDDNVR-----------MISADAPVLLARACEMFIQDLS
BRADIwo_Bradi3g17800.1_133.1_1 PLARIKKIMKASGENVQ-----------MIAGEAHGLLAKACEIFIQELT
NEUCR_NCU00116T0_168.0_1 PLARIKKVMKAD-PEVKM-----------ISAEAPILFAKGCDIFITELT
RHIIR_ESA22217.1_145.7_1 PLARIKKVMKSD-QDVK----------------APILFSKACEIFISEIT
AURAN_8422_140.3_1 PLARIKRIMKLE-DEVQSQLDGRKNM--MVSSEAPVVFAKACELFIREIT
ECTSI_Esi0167_0030_131.1_1 PLARIKKIMRLE-DDIAEAG----APRFMIAAEAPIIIAKACEIFVLEMA
ORYSAJAPONwo_LOC_Os01g39850.1_ PMARLKKIVSSQKGNM------------MMTFDMPAFLSKMCELFVQELA
HOMSAwo_CCDS1957.1_Hs106_chr2_ PLARVKALVKAD-PDVT-----------LAGQEAIFILARAAELFVETIA
KLEFL_kfl00150_0190_84.0_1 PLARVKRLIKAE-SDVT-----------QLTAEAGALITKATELFLEKLA
CYAME_CMQ472C_71.5_1 PLSRVRKIIKYD-SEVS-----------TVREDAVTAIARATELFLEYFL
HOMSAwo_CCDS6379.1_Hs106_chr8_ PLSRIRVIMKSS-PEVS-----------SINQEALVLTAKATELFVQCLA
SACCE_YBR278W_108.2_1 PISKVKKIAKCD-PEYV-----------ITSNVAISATAFAAELFVQNLV
. : :: .

PHYPAV30wo_Phpat.003G138000.1. DKTYEITLRRGA----KTMSSFHLKQCVQ-TNSVFDFLQEI
PHYPAV30wo_Phpat.008G006500.1. DKTYEITLRRGA----KTMNSFHLKQCVQ-TNSVFDFLQEI
PHYPAV30wo_Phpat.004G025200.1. DKTYEITLRRGA----KTMSSIHLKQCVQ-TNSVFDFLQEI
SELMO_gw1.3.131.1_121.7_1 DKTYEITLGRGA----KTMSSSHLKQCVQ-TNSVFDFLREI
VITVI_GSVIVT01036581001_132.7_ DRTYDITLQRGA----KTMSSLHLKHCVQ-RHNVFDFLRDI
BRADIwo_Bradi2g21290.1_121.8_1 DRTYNITVQKGV----KTVSSSHLKQCIH-SYDVYDFLKNV
KLEFL_kfl00260_0090_107.6_1 DETYKVTIARNA----KTVTGSHLKACIE-ANSDFDFLREV
CALTU_IDg19103t1_85.4_1 HDSAMLAVERHT----KTVSPQHLKHIIN-SRAHFDFLRPT
CALTU_IDg9361t1_96.8_1 RDAATVAIKRRT----KTVTPQHLKHSVA-AEAHFDFLRPT
NEUCR_NCU06405T0_103.5_1 TKSADIARERNS----KRVSAQMLKQVVE-SDDQWDFLREI
CHLSP_IGS.gm_12_00016_85.5_1 DGAARIAESRGA----RMLTASHIKAHIQ-GEELLDFLKDA
EMIHU_212580_76.7_1 DRAAAVAEEEGA----KLLTTAHLAKCVE-AEELS-FLQST
GLYMAwo_Glyma.11G250000.1.p_92 EKSAQVAIEKKR----KTVNLEHIRVAVKRHQPTRDFLLDE
CARPA_34.36_175.3_1 LRSWIHTEENKR----RTLQKNDIAAAIS-RTDVFDFLVDI
GLYMAwo_Glyma.08G165700.1.p_17 LRSWIHTEENKR----RTLQKNDIAAAIS-RNDVFDFLVDI
PINTA_000055982-RA LRSWIHTEENKR----STLQKNHIAAAIT-RTNIFHFLLDI
SELMO_gw1.51.449.1_175.6_1 LRSWIHTEENKR----RTLQKNDIAAAIT-RTDIFDFLVDI
PHYPAV30wo_Phpat.014G024300.1. LRSWIHTEENKR----RTLQKNDIAAAIT-RTDIFDFLVDI
BRADIwo_Bradi3g39280.1_169.2_1 HRGWAHAEENKR----RTLQKSDIAAAIA-RTEVFDFLVDI
BRADIwo_Bradi4g33290.1_169.2_1 HRGWAHAEENKR----RTLQKSDIAAAIA-RTEVFDFLVDI
CARPA_13.107_130.6_1 IRSWLHAEENKR----RTLQKNDIAAAIT-RTDIFDFLVDI
ZEAMAwo_GRMZM2G089812_P01_170. IRSWLHAEENKR----RTLQRNDVAAAIA-RTDVFDFLVDI
CYAPA_7210_156.2_1 LRSWIYTEENKR----RTLQRSDIAAAIS-KTDIFDFLIDI
GALSU_XP_005703768.1_167.9_1 IRAWAQTEESKR----RTLQRCDIASAIQ-KTDIFDFLIDI
OSTTA_Ot11g00340_176.5_1 MRAWAHAQENKR----RTLQRGDIAAAIT-KTDIFDFLIDI
CHLRE_Cre12.g556400.t1.1_175.3 LRSWMHAEENKR----RTLQRNDVAAAIT-KTDIFDFLIDI
MICPURCC299_EuGene.1200010037_ LRSWIHSEENKR----RTLQRNDIAAAIT-KTDIFDFLVDI
KLEFL_kfl00591_0040_173.2_1 LRSWIHTEENKR----RTLQRNDIAAAIT-KTDIFDFLVDI
SELMO_gw1.12.920.1_174.7_1 LRAWMHTEENKR----RTLQKNDIAAAVT-RTDIFDFLVDI
PINTA_000085916-RA_120.5_1 LRAWNHTEATKR----RTLQKSDIAAAIN-KTDIFDFLIDI
PINTA_000064116-RA_153.0_1 LRAWNHTEATKR----RTLQKSNIAAAIS-RTNIFDFLIDI
PINTA_000013547-RA_153.6_1 LRAWNNTEETKR----RILHKNDIVAAIT-RTDIFDFLIDI
PINTA_000043006-RA_160.7_1 LRAWIHTEENKR----RTLQKNDIAAAIA-RTDIFDFLIDI
HOMSAwo_CCDS455.1_Hs106_chr1_1 LRAWIHTEDNKR----RTLQRNDIAMAIT-KFDQFDFLIDI
HOMSAwo_CCDS44121.1_Hs106_chr1 LRAWIHTEDNKR----RTLQRNDIAMAIT-KFDQFDFLIDI
SELMO_e_gw1.1.1968.1_164.9_1 FRAWMHTEENKR----RTLQRNDVAGAIS-RADIFDFLVDI
FRACY_206982_160.1_1 IRSWNYSQLHKR----RTLQKEDIREAIQ-KTDIFDFLVDV
AMBTR_evm_27.model.AmTr_v1.0_s QKSWNLTLRGKR----RTLHKDDVAKAIN-ATDVFDFLIDM
BETVUwo_Bv_08570_zsar.t1_151.7 LRSWNCTEESKR----KTLQKADISAALS-TTDLFDFLVDL
BRADIwo_Bradi3g17800.1_133.1_1 LRSWLQTRENNR----RTLQKNDIAAAVS-RNEAFDFLVDI
NEUCR_NCU00116T0_168.0_1 MRAWIHAEENKR----RTLQRSDIASALS-KSDMFDFLIDI
RHIIR_ESA22217.1_145.7_1 MRAWIHAEENKR----RTLQRSDVASAVS-RSDQFDFLIDI
AURAN_8422_140.3_1 TRAWTCTEENKR----RTLQRSDVATAVG-KCDMYDFLIDV
ECTSI_Esi0167_0030_131.1_1 MRANSLTAENKR----RTLQRNDIAMAVS-KTDTYDFLIDI
ORYSAJAPONwo_LOC_Os01g39850.1_ VRAWASAQSHNR----CIILDTDIAKAIA-STESYDFLVDI
HOMSAwo_CCDS1957.1_Hs106_chr2_ KDAYCCAQQGKR----KTLQRRDLDNAIE-AVDEFAFLEGT
KLEFL_kfl00150_0190_84.0_1 TQAARHMVDDSR----VTLRYKDVSTTVK-EEDSLEFLRDI
CYAME_CMQ472C_71.5_1 EETYREATSRTRGRV-KRLNYNDFSKTVQ-EIEALHFLAEL
HOMSAwo_CCDS6379.1_Hs106_chr8_ TYSYRHGSGKEK----KVLTYSDLANTAQ-QSETFQFLADI
SACCE_YBR278W_108.2_1 EESLVLAQLNSKGKTSLRLSLNSIEECVE-KRDNFRFLEDA
: . **