Domain: CCAAT-Dr1_Domain

HMM file

Alignment

CLUSTAL 2.1 multiple sequence alignment


VITVI_GSVIVT01014689001_169.5_ ---EQYMPIAN------------LTRVMRRVLPA----HAKISDDAKETV
POPTRwo_Potri.006G005000.1_207 REQDRFMPIAN------------VIRIMRKILPS----HAKISDDAKETI
SELMO_gw1.12.282.1_182.9_1 REQDRFMPIAN------------VIRIMRKVLPA----HAKISDDAKETI
PHYPAV30wo_Phpat.003G050700.1. REQDRFLPIAN------------ISRIMKKALPA----NAKIAKDAKETV
MICPURCC299_estExt_Genewise2.C REQDRFLPIAN------------ISRIMKKALPA----NAKIAKDAKETV
PHYPAV30wo_Phpat.003G053200.1. REQDRFLPIAN------------ISRIMKKALPA----NAKIAKDAKETV
PINTA_000007908-RA_218.0_1 REQDRFLPIAN------------ISRIMKKAVPA----NAKIAKDAKDTV
VOLCA_Vocar20010774m_213.6_1 REQDRYLPIAN------------ISRIMKKALPG----NAKIAKDAKETV
CHLRE_Cre02.g079200.t1.2_215.7 REQDRFLPIAN------------ISRIMKKALPN----NAKIAKDAKETV
SELMO_e_gw1.23.497.1_221.1_1 REQDRFLPIAN------------ISRIMKKALPA----NAKIAKDAKETV
MIMGUwo_Migut.J00411.1.p_217.1 REQDRFLPIAN------------ISRIMKKALPA----NGKIAKDAKETV
ARATHwo_AT3G53340.1_206.5_1 REQDRFLPIAN------------ISRIMKRGLPL----NGKIAKDAKETM
SORBIwo_Sb09g022810.1_219.9_1 REQDRFLPIAN------------ISRIMKKAIPA----NGKIAKDAKETV
PINTA_000033513-RA_212.3_1 REQDRFLPIAN------------ISRIMKKALPA----NGKIAKDAKETV
KLEFL_kfl00283_0190_216.2_1 REQDRFLPIAN------------IGRIMKRALPS----NGKVAKDAKETV
PINTA_000060955-RA_214.2_1 KEQDRFLPIAN------------VGRIMKKALPA----NGKVSKDAKETV
POPTRwo_Potri.005G065300.1_189 KEQDHFLPIAN------------VGRIMKKEIPG----NGKISKDAKETV
SELMO_estExt_fgenesh2_pg.C_220 KEQERFLPIAN------------VSRIMKKVLPG----NAKISKDAKETV
ZEAMAwo_GRMZM2G180947_P01_211. REQDRFLPIAN------------VSRIMKKALPA----NAKISKDGKETV
SORBIwo_Sb02g038870.1_216.9_1 REQDRFLPIAN------------VSRIMKKALPA----NAKISKDAKETV
VITVI_GSVIVT01022214001_200.2_ KEQDRFLPIAN------------VSRIMKKSLPA----NAKISKEAKETV
EUCGRwo_Eucgr.L00153.1_213.6_1 REQDRFLPIAN------------VSRIMKKALPA----NAKISKEAKETV
GLYMAwo_Glyma.09G014100.1.p_21 REQDRFLPIAN------------VSRIMKKALPA----NAKISKEAKETV
SELMO_gw1.0.1477.1_212.2_1 REQDRFLPIAN------------VSRIMKRGLPG----NAKISKDAKETV
PHYPAV30wo_Phpat.012G010100.1. REQDRFLPIAN------------VSRIMKKALPS----NAKISKDAKETV
PINTA_000088546-RA_196.1_1 REQDRLLPTAN------------VGRIMKRALPG----NAKISKDAKETV
PYRYE_contig_11472_g2737_186.0 RELDKYLPTAN------------IARIMKKALPS----SAKVAKDGKDTI
GALSU_XP_005703176.1_197.7_1 REQEKFLPTAN------------IARIMKKALPP----NAKIAKDGKDTV
FRACY_267774_198.8_1 REQDRYLPIAN------------IARIMKNTLPE----NAKIAKDSKETV
ECTSI_Esi0201_0038_169.9_1 REQDRFLPIAN------------ISRLVKKRLPY----NAKVAKDAKETT
AURAN_55371_186.7_1 REQDRFLPVAN------------IARIMKRVLPP----NEKIAKDAKEAV
DROME_FBpp0310397_163.6_1 REQDRFLPICN------------IIKIMKVPVPQ----NGKIAKDARECI
DROME_FBpp0080827_163.6_1 REQDRFLPICN------------IIKIMKVPVPQ----NGKIAKDARECI
HOMSAwo_CCDS9098.1_Hs106_chr12 REQDIYLPIAN------------VARIMKNAIPQ----TGKIAKDAKECV
ASPNI_ANID_04034T0_168.6_1 KEQDRWLPIANGYVSRDANNNSTVARIMKLALPE----NAKIAKEAKECM
CYAME_CMR350C_166.2_1 HEQERYLPIAN------------ISRCMKGALPE----SSKVSREAKELV
SORBIwo_Sb03g045150.1_177.9_1 KEQDRLLPIAN------------VGRIMKQILPP----NAKISKEAKETM
BRADIwo_Bradi2g60050.1_176.1_1 KEQDRLLPIAN------------VGRIMKQILPP----NAKISKEAKETM
EUCGRwo_Eucgr.H04502.1_163.3_1 DEQEKLLPIAN------------VGRIMKLILPP----SAKISKEAKQTI
SORBIwo_Sb10g010520.1_164.1_1 REQDRLMPVAN------------VSRIMRQVLPP----YAKISDDAKEVI
OSTLU_gwEuk.4.591.1_175.5_1 SDDELQLPRAT------------LHKMINDALRAIDAN-QKISNECREMV
OSTTA_Ot04g05280_180.6_1 GDDEIGLPKAT------------VAKMVTDALKSAGYDAMKMSTECRDLI
DROME_FBpp0080256_205.2_1 EDDELTLPRAS------------INKIIKELVPT-----VRVANESRELI
ASPNI_ANID_09358T0_174.4_1 SNDDLSLPKAT------------VQKIITEILPPS--SGQSFSKDARDLL
NEUCR_NCU02017T0_166.1_1 GNDDLSLPKAT------------VQKIVSEILPSS--TGLSFAKEARDLL
PINTA_000067106-RA_219.9_1 SKDDVSLPKAT------------MFKIIKEMLPP----DVRVARDAQDLL
GLYMAwo_Glyma.17G123600.1.p_21 SKEDASLPKAT------------MTKIIKEMLPP----DVRVARDAQDLL
PHYPAV30wo_Phpat.003G102100.1. PKDDVSLPKAT------------MTKIIKEMLPP----DVRVAKDAQDLL
NAEGR_45181_191.6_1 NREDLTLPKQT------------IVKIIKEHLGE----SIKCAADTRELI
SACCE_YDR397C_169.4_1 DSDNVSLPKAT------------VQKMISEILDQ----DLMFTKDAREII
: :* . : : : : : : ::

VITVI_GSVIVT01014689001_169.5_ QECVSEFISFITSEANDRCHHELRKTITAEDVIAAMSKLGFDDYIDPLTL
POPTRwo_Potri.006G005000.1_207 QECVSEYISFITSEANERCQREQRKTITAEDVLYAMSKLGFDDYIEPLTI
SELMO_gw1.12.282.1_182.9_1 QECVSEFISFITSEANDKCQREQRKTITAEDLLWAMSKLGFDDYADPLSL
PHYPAV30wo_Phpat.003G050700.1. QECVSEFISFITSEASDKCQREKRKTINGDDLLWAMSTLGFEDYVEPLKV
MICPURCC299_estExt_Genewise2.C QECVSEFISFITSEASDKCQREKRKTINGDDLLWAMSTLGFEEYVEPLKV
PHYPAV30wo_Phpat.003G053200.1. QECVSEFISFITSEASDKCQREKRKTINGDDLLWAMSTLGFEDYVEPLKV
PINTA_000007908-RA_218.0_1 QECVSEFISFITSEASDKCQREKRKTINGDDLLWAMGTLGFEDYVEPLKI
VOLCA_Vocar20010774m_213.6_1 QECVSEFISFITSEASDKCQREKRKTINGDDLLWAMTTLGFEEYLEPLKL
CHLRE_Cre02.g079200.t1.2_215.7 QECVSEFISFITSEASDKCQREKRKTINGDDLLWAMTTLGFEEYLEPLKL
SELMO_e_gw1.23.497.1_221.1_1 QECVSEFISFITSEASDKCQREKRKTINGDDLLWAMSTLGFEEYLEPLKI
MIMGUwo_Migut.J00411.1.p_217.1 QECVSEFISFVTSEASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLKV
ARATHwo_AT3G53340.1_206.5_1 QECVSEFISFVTSEASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLKV
SORBIwo_Sb09g022810.1_219.9_1 QECVSEFISFITSEASDKCQREKRKTINGDDLLWAMATLGFEDYIEPLKV
PINTA_000033513-RA_212.3_1 QECVSEFISFITSEASDKCQREKRKTINGDDLLWAMSTLGFEDYIEPLKV
KLEFL_kfl00283_0190_216.2_1 QECVSEFISFITSEASDKCQREKRKTINGDDLLWAMSTLGFEDYVEPLKV
PINTA_000060955-RA_214.2_1 QECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEDYVEPLKI
POPTRwo_Potri.005G065300.1_189 QECVSEFISFVTGEASDKCQREKRKTINGDDIIWAITTLGFEDYVAPLKL
SELMO_estExt_fgenesh2_pg.C_220 QECVSEFISFITGEASDKCKREKRKTINGDDLLWAMGTLGFEDYIDPLKL
ZEAMAwo_GRMZM2G180947_P01_211. QECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEDYVEPLKL
SORBIwo_Sb02g038870.1_216.9_1 QECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEDYIEPLKL
VITVI_GSVIVT01022214001_200.2_ QECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTMLGFENYVGPLKV
EUCGRwo_Eucgr.L00153.1_213.6_1 QECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKV
GLYMAwo_Glyma.09G014100.1.p_21 QECVSEFISFITGEASDKCQKEKRKTINGDDLLWAMTTLGFEDYVDPLKI
SELMO_gw1.0.1477.1_212.2_1 QECVSEFISFVTGEASDKCQREKRKTINGDDLLWAMSTLGFEDYVEPLRV
PHYPAV30wo_Phpat.012G010100.1. QECVSEFISFITGEASDKCQREKRKTINGDDLLWAMSTLGFEDYVEPLKV
PINTA_000088546-RA_196.1_1 QECVSEFISFITSEASDKCQREKRKTVNGDDLLWGMTTLGFEDYVEPLKI
PYRYE_contig_11472_g2737_186.0 QECVSEFVSFITSEASDKCQREKRKTINGDDILWAMSTLGFDKYIEPLKV
GALSU_XP_005703176.1_197.7_1 QECVSEFVSFITSEASDKCQREKRKTINGDDILWAMNTLGFDNYVEPLKI
FRACY_267774_198.8_1 QECVSEFISFITSEASDKCLQEKRKTINGDDLLWAMSTLGFDKYVEPLKL
ECTSI_Esi0201_0038_169.9_1 QECVSEFICWITADASDKCQDEKRKTISGEDIITSMNTLGFDDYIEPLKV
AURAN_55371_186.7_1 QECVSEFICFVTSEASDRCQTEKRKTINGDDLVWAMGTLGFDDYVNPLKT
DROME_FBpp0310397_163.6_1 QECVSEFISFISSEAIERSVAENRKTVNGDDLLVAFSNLGFDNYVEPLSI
DROME_FBpp0080827_163.6_1 QECVSEFISFISSEAIERSVAENRKTVNGDDLLVAFSNLGFDNYVEPLSI
HOMSAwo_CCDS9098.1_Hs106_chr12 QECVSEFISFITSEASERCHQEKRKTINGEDILFAMSTLGFDSYVEPLKL
ASPNI_ANID_04034T0_168.6_1 QECVSEFISFITSEASEKCQQEKRKTVNGEDILFAMTSLGFENYAEALKI
CYAME_CMR350C_166.2_1 QEATSEFISFITSESSDKCMRERRKTICGEDILYAMRTLGFEEYIPPLMA
SORBIwo_Sb03g045150.1_177.9_1 QECVSEFISFVTGEASDKCHKEKRKTVNGDDVCWAFGALGFDDYVDPMRR
BRADIwo_Bradi2g60050.1_176.1_1 QECVSEFISFVTGEASDKCHKEKRKTVNGDDVCWAFSALGFDDYVDPMRR
EUCGRwo_Eucgr.H04502.1_163.3_1 QECASEFISFVTGEASDKCHKENRKTVNGDDICWALSSLGFDDYAEAIVR
SORBIwo_Sb10g010520.1_164.1_1 QECVSEFISFVTGEANERCHTERRKTVASEDIVWALNRLGFDDYVAPVGT
OSTLU_gwEuk.4.591.1_175.5_1 CECGDEFVNAVSAEANEASTREGKSTITAEHVLRALRALGFESYEAECEI
OSTTA_Ot04g05280_180.6_1 VECCSEFVQAVSSEANEVSTKERKSTITAEHVLRALRVLGFEAYENECAI
DROME_FBpp0080256_205.2_1 LNCCSEFIHLISSEANEVCNMRNKKTINAEHVLEALERLGFHDYKQEAEA
ASPNI_ANID_09358T0_174.4_1 MECCVEFITLISSEANDISEKEAKKTIACEHVERALRDLGFGDYVPDVLA
NEUCR_NCU02017T0_166.1_1 IDLCVEFISLVSSEANEISEKESKKTIACDHITQALERLGFADYVPAVLE
PINTA_000067106-RA_219.9_1 VECCVEFINLISSESNEVCGREEKRTIAPEHVLRALEVLGFGDYIEEVYA
GLYMAwo_Glyma.17G123600.1.p_21 IECCVEFINLVSSESNEVCNREDKRTIAPEHVLKALQVLGFGEYIEEVYA
PHYPAV30wo_Phpat.003G102100.1. VECCVEFINLISSESNEICSKDEKRTIAPEHVLRALEILGFGEYIGEVQA
NAEGR_45181_191.6_1 VECCVEFVQMIAAESNSICESDKRKTIAGEHVTEALRRLGYSEYLGLVNE
SACCE_YDR397C_169.4_1 INSGIEFIMILSSMASEMADNEAKKTIAPEHVIKALEELEYNEFIPFLEE
: *:: ::. : . . : *: :.: .: * : :

VITVI_GSVIVT01014689001_169.5_ YLHRYRESE
POPTRwo_Potri.006G005000.1_207 YLHRYRELE
SELMO_gw1.12.282.1_182.9_1 FLHKYR---
PHYPAV30wo_Phpat.003G050700.1. YLHKYREIE
MICPURCC299_estExt_Genewise2.C YLHKYRETE
PHYPAV30wo_Phpat.003G053200.1. YLHKYREGA
PINTA_000007908-RA_218.0_1 YLHKYREMD
VOLCA_Vocar20010774m_213.6_1 YLAKFREAE
CHLRE_Cre02.g079200.t1.2_215.7 YLAKFREAE
SELMO_e_gw1.23.497.1_221.1_1 YLQKYREVT
MIMGUwo_Migut.J00411.1.p_217.1 YLARYREME
ARATHwo_AT3G53340.1_206.5_1 YLMRYREME
SORBIwo_Sb09g022810.1_219.9_1 YLQKYREME
PINTA_000033513-RA_212.3_1 YLLMYREGD
KLEFL_kfl00283_0190_216.2_1 YLHKYRETE
PINTA_000060955-RA_214.2_1 YLHKYREME
POPTRwo_Potri.005G065300.1_189 YLNKYREIE
SELMO_estExt_fgenesh2_pg.C_220 YLQRGYAIS
ZEAMAwo_GRMZM2G180947_P01_211. YLHKFRELE
SORBIwo_Sb02g038870.1_216.9_1 YLHKFRELE
VITVI_GSVIVT01022214001_200.2_ YLSKYRETE
EUCGRwo_Eucgr.L00153.1_213.6_1 YLQKFREIE
GLYMAwo_Glyma.09G014100.1.p_21 YLHKYREME
SELMO_gw1.0.1477.1_212.2_1 YLHKYREQE
PHYPAV30wo_Phpat.012G010100.1. YLHKYRELE
PINTA_000088546-RA_196.1_1 YLNKYRELK
PYRYE_contig_11472_g2737_186.0 YLSRYRETM
GALSU_XP_005703176.1_197.7_1 YLARYREAM
FRACY_267774_198.8_1 YLSKYREAV
ECTSI_Esi0201_0038_169.9_1 YLAKYRAAV
AURAN_55371_186.7_1 YLTKYRQAA
DROME_FBpp0310397_163.6_1 YLQKYRESN
DROME_FBpp0080827_163.6_1 YLQKYRESN
HOMSAwo_CCDS9098.1_Hs106_chr12 YLQKFREAM
ASPNI_ANID_04034T0_168.6_1 YLSKYRETQ
CYAME_CMR350C_166.2_1 YLERYRTLE
SORBIwo_Sb03g045150.1_177.9_1 YLHKYRELE
BRADIwo_Bradi2g60050.1_176.1_1 YLLKFRELE
EUCGRwo_Eucgr.H04502.1_163.3_1 YLHKYREHE
SORBIwo_Sb10g010520.1_164.1_1 FLQRMRESE
OSTLU_gwEuk.4.591.1_175.5_1 ARDEAKEEE
OSTTA_Ot04g05280_180.6_1 ARDEAKEEE
DROME_FBpp0080256_205.2_1 VLHDCKEVA
ASPNI_ANID_09358T0_174.4_1 VAEEHKEQL
NEUCR_NCU02017T0_166.1_1 AAAEHKEVQ
PINTA_000067106-RA_219.9_1 AYEQHRLET
GLYMAwo_Glyma.17G123600.1.p_21 AYEQHKLET
PHYPAV30wo_Phpat.003G102100.1. AYEQHKNES
NAEGR_45181_191.6_1 AHNQHKVES
SACCE_YDR397C_169.4_1 ILLNFKGSQ